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RRH retinal pigment epithelium-derived rhodopsin homolog [ Phascolarctos cinereus (koala) ]

Gene ID: 110218639, updated on 15-Mar-2024

Summary

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Gene symbol
RRH
Gene description
retinal pigment epithelium-derived rhodopsin homolog
See related
Ensembl:ENSPCIG00000018914
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344042.1 (7678444..7697929, complement)

NW_018344042.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 3 Neighboring gene uncharacterized LOC110218596 Neighboring gene GAR1 ribonucleoprotein Neighboring gene complement factor I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344042 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in photoreceptor outer segment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
visual pigment-like receptor peropsin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344042.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    7678444..7697929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021001428.1 → XP_020857087.1  visual pigment-like receptor peropsin

    UniProtKB/TrEMBL
    A0A6P5LG80
    Related
    ENSPCIP00000025145.1, ENSPCIT00000030956.2
    Conserved Domains (1) summary
    cd15073
    Location:23 → 302
    7tmA_Peropsin; retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
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