U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NFIC nuclear factor I C [ Phascolarctos cinereus (koala) ]

Gene ID: 110196202, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NFIC
Gene description
nuclear factor I C
See related
Ensembl:ENSPCIG00000025322
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344142.1 (838920..975120, complement)

NW_018344142.1Genomic Context describing neighboring genes Neighboring gene deoxyhypusine hydroxylase Neighboring gene small integral membrane protein 24 Neighboring gene unc-13 homolog A Neighboring gene BLOC-1 related complex subunit 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018344142 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear factor 1 C-type

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344142.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    838920..975120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020969340.1 → XP_020824999.1  nuclear factor 1 C-type isoform X2

    UniProtKB/TrEMBL
    A0A6P5J285
    Related
    ENSPCIP00000034223.2, ENSPCIT00000042111.2
    Conserved Domains (3) summary
    pfam00859
    Location:208 → 467
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:60 → 164
    MH1; MH1 domain
    pfam10524
    Location:1 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  2. XM_020969339.1 → XP_020824998.1  nuclear factor 1 C-type isoform X1

    UniProtKB/TrEMBL
    A0A6P5IVG1
    Related
    ENSPCIP00000034219.2, ENSPCIT00000042107.2
    Conserved Domains (3) summary
    pfam00859
    Location:217 → 476
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  3. XM_020969341.1 → XP_020825000.1  nuclear factor 1 C-type isoform X3

    UniProtKB/TrEMBL
    A0A6P5IS69
    Conserved Domains (3) summary
    pfam00859
    Location:217 → 509
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  4. XM_020969345.1 → XP_020825004.1  nuclear factor 1 C-type isoform X6

    UniProtKB/TrEMBL
    A0A6P5J291
    Related
    ENSPCIP00000034224.1, ENSPCIT00000042112.2
    Conserved Domains (3) summary
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:217 → 423
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain

  5. XM_020969342.1 → XP_020825001.1  nuclear factor 1 C-type isoform X4

    UniProtKB/TrEMBL
    A0A6P5J1C5
    Related
    ENSPCIP00000034215.2, ENSPCIT00000042103.2
    Conserved Domains (3) summary
    pfam00859
    Location:217 → 509
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus

  6. XM_020969343.1 → XP_020825002.1  nuclear factor 1 C-type isoform X5

    UniProtKB/TrEMBL
    A0A6P5IVG9
    Conserved Domains (3) summary
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:217 → 424
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain

  7. XM_020969344.1 → XP_020825003.1  nuclear factor 1 C-type isoform X5

    UniProtKB/TrEMBL
    A0A6P5IVG9
    Conserved Domains (3) summary
    pfam10524
    Location:10 → 47
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:217 → 424
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam03165
    Location:69 → 173
    MH1; MH1 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.