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bbs5 Bardet-Biedl syndrome 5 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110166650, updated on 15-Mar-2024

Summary

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Gene symbol
bbs5
Gene description
Bardet-Biedl syndrome 5
Locus tag
NL108_007625
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026570970.1 (15130812..15133442)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018356909.1 (2254052..2256238)

NW_026570970.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit beta, mitochondrial-like Neighboring gene collagen, type XXVIII, alpha 2a Neighboring gene kelch-like family member 41a Neighboring gene FAST kinase domains 1 Neighboring gene peptidylprolyl isomerase G (cyclophilin G)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BBSome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 5 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026570970.1 Reference ASM2622593v1 Primary Assembly

    Range
    15130812..15133442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020931932.2 → XP_020787591.2  Bardet-Biedl syndrome 5 protein homolog isoform X1

  2. XM_055151247.1 → XP_055007222.1  Bardet-Biedl syndrome 5 protein homolog isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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