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p3h4 prolyl 3-hydroxylase family member 4 (inactive) [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110161775, updated on 15-Mar-2024

Summary

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Gene symbol
p3h4
Gene description
prolyl 3-hydroxylase family member 4 (inactive)
Locus tag
NL108_013187
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571115.1 (10247657..10255823)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018346192.1 (722682..730152)

NW_026571115.1Genomic Context describing neighboring genes Neighboring gene NFKB inhibitor interacting Ras-like 2 Neighboring gene cytosolic 5'-nucleotidase 3 Neighboring gene FKBP prolyl isomerase 10a Neighboring gene disintegrin and metalloproteinase domain-containing protein 11-like Neighboring gene P43 5S RNA-binding protein Neighboring gene carbonic anhydrase 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen fibril organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum protein SC65
Names
prolyl 3-hydroxylase family member 4 (non-enzymatic)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571115.1 Reference ASM2622593v1 Primary Assembly

    Range
    10247657..10255823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020926603.2 → XP_020782262.2  endoplasmic reticulum protein SC65

Nucleotide Protein
Heading Accession and Version

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