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sdccag8 SHH signaling and ciliogenesis regulator sdccag8 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110156797, updated on 15-Mar-2024

Summary

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Gene symbol
sdccag8
Gene description
SHH signaling and ciliogenesis regulator sdccag8
Locus tag
NL108_006232
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571404.1 (24039354..24072651)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018354069.1 (8793680..8825804)

NW_026571404.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129411536 Neighboring gene tumor necrosis factor, alpha-induced protein 3 Neighboring gene v-akt murine thymoma viral oncogene homolog 3a Neighboring gene zinc finger and BTB domain containing 18 Neighboring gene equilibrative nucleoside transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centrosome cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tube formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serologically defined colon cancer antigen 8 homolog
Names
serologically defined colon cancer antigen 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571404.1 Reference ASM2622593v1 Primary Assembly

    Range
    24039354..24072651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020921023.2 → XP_020776682.1  serologically defined colon cancer antigen 8 homolog

    Conserved Domains (1) summary
    pfam15964
    Location:5 → 678
    CCCAP; Centrosomal colon cancer autoantigen protein family
Nucleotide Protein
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Gene LinkOut

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