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LOC110155634 NPC intracellular cholesterol transporter 2 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110155634, updated on 16-Nov-2023

Summary

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Gene symbol
LOC110155634
Gene description
NPC intracellular cholesterol transporter 2
Locus tag
NL108_012563
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Also known as
npc2
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571562.1 (16057..17654, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018353624.1 (10095880..10097407)

NW_026571562.1Genomic Context describing neighboring genes Neighboring gene autophagy-related protein 2 homolog B Neighboring gene gsk3b interacting protein Neighboring gene echinoderm microtubule-associated protein-like 5 Neighboring gene iron-sulfur cluster assembly 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular cholesterol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NPC intracellular cholesterol transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571562.1 Reference ASM2622593v1 Primary Assembly

    Range
    16057..17654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020919771.2 → XP_020775430.1  NPC intracellular cholesterol transporter 2

    Conserved Domains (1) summary
    cd00916
    Location:24 → 147
    Npc2_like; Niemann-Pick type C2 (Npc2) is a lysosomal protein in which a mutation in the gene causes a rare form of Niemann-Pick type C disease, an autosomal recessive lipid storage disorder characterized by accumulation of low-density lipoprotein-derived ...

  2. XM_055148154.1 → XP_055004129.1  NPC intracellular cholesterol transporter 2

Nucleotide Protein
Heading Accession and Version

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