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FBLN5 fibulin 5 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110126330, updated on 15-Mar-2024

Summary

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Gene symbol
FBLN5
Gene description
fibulin 5
See related
EnsemblRapid:ENSOVIG00010015429
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018339397.1 (1926680..2013202)

NW_018339397.1Genomic Context describing neighboring genes Neighboring gene ataxin 3 Neighboring gene thyroid hormone receptor interactor 11 Neighboring gene uncharacterized protein C8orf59 homolog Neighboring gene tandem C2 domains, nuclear Neighboring gene astrocytic phosphoprotein PEA-15 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018339397 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibulin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018339397.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    1926680..2013202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020875932.1 → XP_020731591.1  fibulin-5 isoform X2

    UniProtKB/TrEMBL
    A0A6J0W2R3
    Related
    ENSOVIP00010021933.1, ENSOVIT00010024760.1
    Conserved Domains (5) summary
    smart00179
    Location:207 → 245
    EGF_CA; Calcium-binding EGF-like domain
    pfam07645
    Location:127 → 160
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:187 → 210
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:258 → 286
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:161 → 204
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_020875931.1 → XP_020731590.1  fibulin-5 isoform X1

    UniProtKB/TrEMBL
    A0A6J0W5I6
    Related
    ENSOVIP00010021977.1, ENSOVIT00010024808.1
    Conserved Domains (5) summary
    smart00179
    Location:220 → 258
    EGF_CA; Calcium-binding EGF-like domain
    pfam07645
    Location:140 → 173
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:200 → 223
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:271 → 299
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:174 → 217
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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