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EGLN3 egl-9 family hypoxia inducible factor 3 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110122895, updated on 15-Mar-2024

Summary

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Gene symbol
EGLN3
Gene description
egl-9 family hypoxia inducible factor 3
See related
EnsemblRapid:ENSOVIG00010018013
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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See EGLN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018337953.1 (2445093..2896043)

NW_018337953.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene uncharacterized LOC110122899 Neighboring gene serine palmitoyltransferase small subunit A Neighboring gene zinc finger protein 322-like Neighboring gene uncharacterized LOC110122898 Neighboring gene uncharacterized LOC110122870 Neighboring gene neuronal PAS domain protein 3 Neighboring gene uncharacterized LOC110122912

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018337953 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
egl nine homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018337953.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    2445093..2896043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020870515.1 → XP_020726174.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_020870518.1 → XP_020726177.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_020870521.1 → XP_020726180.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  4. XM_020870522.1 → XP_020726181.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  5. XM_020870516.1 → XP_020726175.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  6. XM_020870519.1 → XP_020726178.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  7. XM_020870523.1 → XP_020726182.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  8. XM_020870524.1 → XP_020726183.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  9. XM_020870517.1 → XP_020726176.1  egl nine homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0VRN4
    Conserved Domains (1) summary
    smart00702
    Location:79 → 172
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  10. XM_020870514.1 → XP_020726173.1  egl nine homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0VM57
    Conserved Domains (1) summary
    smart00702
    Location:90 → 183
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  11. XM_020870513.1 → XP_020726172.1  egl nine homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J0VL81
    Related
    ENSOVIP00010025578.1, ENSOVIT00010028882.1
    Conserved Domains (1) summary
    smart00702
    Location:36 → 213
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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