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CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110080062, updated on 15-Mar-2024

Summary

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Gene symbol
CPLANE1
Gene description
ciliogenesis and planar polarity effector complex subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Also known as
CUNH5orf42
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
55
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150885.1 (1347039..1429247)

NW_018150885.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 70 Neighboring gene nucleoporin 155 Neighboring gene uncharacterized LOC110080064 Neighboring gene NIPBL cohesin loading factor Neighboring gene solute carrier family 1 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018150885.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein JBTS17
Names
chromosome unknown C5orf42 homolog
ciliogenesis and planar polarity effector 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150885.1 Reference pvi1.1

    Range
    1347039..1429247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020795664.1 → XP_020651323.1  protein JBTS17 isoform X2

    UniProtKB/TrEMBL
    A0A6J0TUQ7
    Conserved Domains (1) summary
    pfam15392
    Location:2884 → 3187
    Joubert; Joubert syndrome-associated

  2. XM_020795663.1 → XP_020651322.1  protein JBTS17 isoform X1

    UniProtKB/TrEMBL
    A0A6J0TSM6
    Conserved Domains (1) summary
    pfam15392
    Location:2883 → 3217
    Joubert; Joubert syndrome-associated
Nucleotide Protein
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