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runx2a RUNX family transcription factor 2a [ Labrus bergylta (ballan wrasse) ]

Gene ID: 110000164, updated on 1-Aug-2024

Summary

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Gene symbol
runx2a
Gene description
RUNX family transcription factor 2a
See related
Ensembl:ENSLBEG00000019529
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
runx2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 10 NC_089204.1 (14941198..14943100)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018115051.1 (175556..179111)

Chromosome 10 - NC_089204.1Genomic Context describing neighboring genes Neighboring gene CDC5 cell division cycle 5-like (S. pombe) Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene follistatin-related protein 1-like Neighboring gene cadherin 5 Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hemopoiesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RUNX family transcription factor 2a
Names
RUNX family transcription factor 2
runt related transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089204.1 Reference fLabBer1.1

    Range
    14941198..14943100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065959779.1 → XP_065815851.1  RUNX family transcription factor 2a

    UniProtKB/TrEMBL
    A0A3Q3G3J1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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