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rad23b RAD23 homolog B, nucleotide excision repair protein [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109997149, updated on 26-Jun-2024

Summary

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Gene symbol
rad23b
Gene description
RAD23 homolog B, nucleotide excision repair protein
See related
Ensembl:ENSLBEG00000019058
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 17 NC_089211.1 (18703988..18710973)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114817.1 (8401..15337, complement)

Chromosome 17 - NC_089211.1Genomic Context describing neighboring genes Neighboring gene alpha-methylacyl-CoA racemase Neighboring gene lysosome membrane protein 2 Neighboring gene Kruppel like factor 4 Neighboring gene alpha-synuclein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UV excision repair protein RAD23 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089211.1 Reference fLabBer1.1

    Range
    18703988..18710973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020651537.3 → XP_020507193.1  UV excision repair protein RAD23 homolog B

    UniProtKB/TrEMBL
    A0A3Q3FZY0
    Related
    ENSLBEP00000024949.1
    Conserved Domains (1) summary
    cl28408
    Location:1 → 381
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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