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fkbp6 FKBP prolyl isomerase 6 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109982930, updated on 27-Jun-2024

Summary

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Gene symbol
fkbp6
Gene description
FKBP prolyl isomerase 6
See related
Ensembl:ENSLBEG00000023691
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
zebrafish all
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Genomic context

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See fkbp6 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 15 NC_089209.1 (16615910..16619204)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114462.1 (54858..58910)

Chromosome 15 - NC_089209.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 200A Neighboring gene transmembrane protein 244 Neighboring gene Rho GTPase activating protein 18 Neighboring gene SEL1L adaptor subunit of SYVN1 ubiquitin ligase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp90 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive peptidyl-prolyl cis-trans isomerase FKBP6
Names
FK506 binding protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089209.1 Reference fLabBer1.1

    Range
    16615910..16619204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020632406.3 → XP_020488062.1  inactive peptidyl-prolyl cis-trans isomerase FKBP6

    UniProtKB/TrEMBL
    A0A3Q3NBC1
    Related
    ENSLBEP00000031385.1
    Conserved Domains (4) summary
    COG0457
    Location:171 → 316
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:257 → 287
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:44 → 144
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    pfam14559
    Location:239 → 301
    TPR_19; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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