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nup50 nucleoporin 50 [ Monopterus albus (swamp eel) ]

Gene ID: 109967665, updated on 14-Mar-2024

Summary

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Gene symbol
nup50
Gene description
nucleoporin 50
See related
Ensembl:ENSMALG00000007759
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128014.1 (2678429..2686328, complement)

NW_018128014.1Genomic Context describing neighboring genes Neighboring gene F-box protein 7 Neighboring gene kiaa0930 Neighboring gene uncharacterized LOC109967666 Neighboring gene PHD finger protein 21B Neighboring gene Rho GTPase activating protein 8 Neighboring gene shaker-related potassium channel tsha2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128014.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup50

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128014.1 Reference M_albus_1.0 Primary Assembly

    Range
    2678429..2686328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020613405.1 → XP_020469061.1  nuclear pore complex protein Nup50

    UniProtKB/TrEMBL
    A0A3Q3JBE6
    Related
    ENSMALP00000010927.1, ENSMALT00000011158.1
    Conserved Domains (2) summary
    cd13170
    Location:324 → 440
    RanBD_NUP50; Nucleoporin 50 Ran-binding domain
    pfam08911
    Location:3 → 65
    NUP50; NUP50 (Nucleoporin 50 kDa)
Nucleotide Protein
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