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lime1 Lck interacting transmembrane adaptor 1 [ Monopterus albus (swamp eel) ]

Gene ID: 109964656, updated on 12-Sep-2024

Summary

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Gene symbol
lime1
Gene description
Lck interacting transmembrane adaptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127971.1 (590638..625140)

NW_018127971.1Genomic Context describing neighboring genes Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene sodium/potassium transporting ATPase interacting 4 Neighboring gene SLC2A4 regulator Neighboring gene zinc finger and BTB domain containing 46

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127971.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lck-interacting transmembrane adapter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127971.1 Reference M_albus_1.0 Primary Assembly

    Range
    590638..625140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020608118.1 → XP_020463774.1  lck-interacting transmembrane adapter 1

    Conserved Domains (1) summary
    pfam15332
    Location:33 → 125
    LIME1; Lck-interacting transmembrane adapter 1
Nucleotide Protein
Heading Accession and Version

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