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prdm12b PR domain containing 12b [ Monopterus albus (swamp eel) ]

Gene ID: 109960621, updated on 14-Mar-2024

Summary

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Gene symbol
prdm12b
Gene description
PR domain containing 12b
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Also known as
prdm12
Orthologs
human zebrafish all
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Genomic context

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See prdm12b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127929.1 (2143490..2147615)

NW_018127929.1Genomic Context describing neighboring genes Neighboring gene argininosuccinate synthase 1 Neighboring gene far upstream element (FUSE) binding protein 3 Neighboring gene uncharacterized LOC109960597 Neighboring gene F-box and WD repeat domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127929.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain zinc finger protein 12
Names
PR/SET domain 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127929.1 Reference M_albus_1.0 Primary Assembly

    Range
    2143490..2147615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020600846.1 → XP_020456502.1  PR domain zinc finger protein 12

    UniProtKB/TrEMBL
    A0A3Q3KEB2
    Conserved Domains (4) summary
    sd00017
    Location:187 → 207
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:186 → 207
    zf-C2H2; Zinc finger, C2H2 type
    pfam00856
    Location:32 → 136
    SET; SET domain
    pfam13465
    Location:199 → 224
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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