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pigv phosphatidylinositol glycan anchor biosynthesis, class V [ Rhincodon typus (whale shark) ]

Gene ID: 109937826, updated on 14-Mar-2024

Summary

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Gene symbol
pigv
Gene description
phosphatidylinositol glycan anchor biosynthesis, class V
See related
EnsemblRapid:ENSRTYG00015012554
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 27
Exon count:
4
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 27 NC_063358.1 (13912235..13918974)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018029429.1 (286309..292700)

Chromosome 27 - NC_063358.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109937801 Neighboring gene AT-rich interactive domain-containing protein 1A Neighboring gene zinc finger DHHC-type palmitoyltransferase 18a Neighboring gene uncharacterized LOC125486265 Neighboring gene uncharacterized protein C1orf232

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC18-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063358.1 Reference sRhiTyp1.1

    Range
    13912235..13918974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048613002.1 → XP_048468959.1  palmitoyltransferase ZDHHC18-A isoform X1

    Related
    ENSRTYP00015019506.1, ENSRTYT00015021587.1

  2. XM_048613003.1 → XP_048468960.1  palmitoyltransferase ZDHHC18-A isoform X1

  3. XM_048613004.1 → XP_048468961.1  palmitoyltransferase ZDHHC18-A isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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