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sdf4 stromal cell derived factor 4 [ Rhincodon typus (whale shark) ]

Gene ID: 109927486, updated on 14-Mar-2024

Summary

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Gene symbol
sdf4
Gene description
stromal cell derived factor 4
See related
EnsemblRapid:ENSRTYG00015012583
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 31
Exon count:
6
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 31 NC_063362.1 (19415282..19483005, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018056398.1 (195..21357)

Chromosome 31 - NC_063362.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 11 Neighboring gene tumor necrosis factor receptor superfamily member 4 Neighboring gene zinc finger protein 239-like Neighboring gene UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 Neighboring gene C1q and TNF related 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
45 kDa calcium-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063362.1 Reference sRhiTyp1.1

    Range
    19415282..19483005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048614886.1 → XP_048470843.1  45 kDa calcium-binding protein

    Related
    ENSRTYP00015019557.1, ENSRTYT00015021665.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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