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smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [ Rhincodon typus (whale shark) ]

Gene ID: 109921140, updated on 14-Mar-2024

Summary

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Gene symbol
smarcd1
Gene description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
See related
EnsemblRapid:ENSRTYG00015017380
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 41
Exon count:
13
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 41 NC_063372.1 (8958896..9003577)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018041944.1 (13787..66505)

Chromosome 41 - NC_063372.1Genomic Context describing neighboring genes Neighboring gene rac GTPase-activating protein 1-like Neighboring gene acid-sensing ion channel 1-like Neighboring gene RNA-binding motif, single-stranded-interacting protein 2-like Neighboring gene glycerol-3-phosphate dehydrogenase 1-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063372.1 Reference sRhiTyp1.1

    Range
    8958896..9003577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048618864.1 → XP_048474821.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

    Related
    ENSRTYP00015027240.1, ENSRTYT00015030275.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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