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LOC109915215 V-type proton ATPase subunit d 1 [ Rhincodon typus (whale shark) ]

Gene ID: 109915215, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109915215
Gene description
V-type proton ATPase subunit d 1
See related
EnsemblRapid:ENSRTYG00015000732
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
atp6v0d1
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) Unplaced Scaffold NW_025966275.1 (15297..35522)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018034297.1 (133966..172343, complement)

NW_025966275.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L28-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit d 1
Names
ATPase H+ transporting V0 subunit d1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NW_025966275.1 Reference sRhiTyp1.1

    Range
    15297..35522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048621411.1 → XP_048477368.1  V-type proton ATPase subunit d 1

    Related
    ENSRTYP00015001068.1, ENSRTYT00015001195.1
Nucleotide Protein
Heading Accession and Version

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