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LOC109898945 transmembrane protein 130 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109898945, updated on 18-Aug-2023

Summary

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Gene symbol
LOC109898945
Gene description
transmembrane protein 130
See related
Ensembl:ENSOKIG00005006751
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
tmem130
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Genomic context

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Location:
chromosome: LG11
Exon count:
7
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG11 NC_034184.2 (11473837..11479533)
100 previous assembly Okis_V1 (GCF_002021735.1) LG11 NC_034184.1 (68592633..68594749, complement)

Linkage Group LG11 - NC_034184.2Genomic Context describing neighboring genes Neighboring gene brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 Neighboring gene uncharacterized LOC109899185 Neighboring gene transmembrane protein 130-like Neighboring gene extracellular serine/threonine protein kinase FAM20C-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 130

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034184.2 Reference Okis_V2 Primary Assembly

    Range
    11473837..11479533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031835281.1 → XP_031691141.1  transmembrane protein 130

    UniProtKB/TrEMBL
    A0A8C7D2J0
    Related
    ENSOKIP00005015167.1, ENSOKIT00005016126.1
    Conserved Domains (2) summary
    TIGR00864
    Location:71 → 221
    PCC; polycystin cation channel protein
    cd00146
    Location:71 → 114
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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