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s100p S100 calcium binding protein P [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109896476, updated on 14-Dec-2023

Summary

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Gene symbol
s100p
Gene description
S100 calcium binding protein P
See related
Ensembl:ENSOKIG00005025743
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: LG9
Exon count:
2
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG9 NC_034182.2 (37181648..37182514, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG9 NC_034182.1 (35145964..35147342, complement)

Linkage Group LG9 - NC_034182.2Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 14 Neighboring gene KIAA0232 ortholog Neighboring gene uncharacterized LOC109897134 Neighboring gene mannosidase, alpha, class 2B, member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transition metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-P

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034182.2 Reference Okis_V2 Primary Assembly

    Range
    37181648..37182514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020490738.2 → XP_020346327.1  protein S100-P

    UniProtKB/TrEMBL
    A0A8C7HMX1
    Related
    ENSOKIP00005059975.1, ENSOKIT00005063758.1
    Conserved Domains (1) summary
    cd00213
    Location:2 → 87
    S-100; S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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