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LOC109887648 DNA-binding protein inhibitor ID-4 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109887648, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109887648
Gene description
DNA-binding protein inhibitor ID-4
See related
Ensembl:ENSOKIG00005027827
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
id4
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Okis_V2 (GCF_002021735.2) Unplaced Scaffold NW_022265969.1 (111447..128160, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018099202.1 (2466..3037, complement)

NW_022265969.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein of 76 kDa-like Neighboring gene putative protein TPRXL

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein inhibitor ID-4
Names
inhibitor of DNA binding 4, HLH protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NW_022265969.1 Reference Okis_V2 Primary Assembly

    Range
    111447..128160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031821864.1 → XP_031677724.1  DNA-binding protein inhibitor ID-4

    UniProtKB/TrEMBL
    A0A8C7HRW1
    Related
    ENSOKIP00005064774.1, ENSOKIT00005068865.1
    Conserved Domains (1) summary
    cl00081
    Location:40 → 99
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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