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cp ceruloplasmin [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109882668, updated on 14-Mar-2024

Summary

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Gene symbol
cp
Gene description
ceruloplasmin
See related
Ensembl:ENSOKIG00005038608
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
20
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG13 NC_034186.2 (7624598..7652807)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018090999.1 (121449..151151, complement)

Linkage Group LG13 - NC_034186.2Genomic Context describing neighboring genes Neighboring gene transmembrane 4 L six family member 4 Neighboring gene transmembrane 4 L six family member 18 Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene CY domain-containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceruloplasmin
Names
hephaestin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034186.2 Reference Okis_V2 Primary Assembly

    Range
    7624598..7652807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031785491.1 → XP_031641351.1  ceruloplasmin

    UniProtKB/TrEMBL
    A0A8C7JL55, A0A8C7MZA4
    Related
    ENSOKIP00005089124.1, ENSOKIT00005095253.1
    Conserved Domains (3) summary
    cd11022
    Location:679 → 822
    CuRO_4_ceruloplasmin; The fourth cupredoxin domain of Ceruloplasmin
    pfam15662
    Location:244 → 328
    SPATA3; Spermatogenesis-associated protein 3 family
    cl19115
    Location:23 → 205
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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