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SCO2778 hydroxymethylglutaryl-CoA lyase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098212, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO2778
Gene description
hydroxymethylglutaryl-CoA lyase
Locus tag
SCO2778
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
hmgL; SCC105.09
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 3031190-3032038 Pfam match to entry PF00682 HMGL-like, HMGL-like, score 226.60, E-value 3.6e-64

General protein information

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Names
hydroxymethylglutaryl-CoA lyase
NP_627008.1
  • SCC105.09, hmgL, hydroxymethylglutaryl-CoA lyase, len: 317 aa; similar to TR:P95639 (EMBL:U41280) Rhodospirillum rubrum hydroxymethylglutaryl-CoA lyase (EC4.1.3.4) HmgL, 303 aa; fasta scores: opt: 924 z-score: 1043.1 E(): 0; 51.2% identity in 297 aa overlap and to SW:HMGL_RAT (EMBL:Y10054) Rattus norvegicus hydroxymethylglutaryl-CoA lyase, mitochondrial precursor (EC 4.1.3.4) HmgCL, 325 aa; fasta scores: opt: 983 z-score: 1108.8 E(): 0; 52.7% identity in 296 aa overlap. Contains Pfam match to entry PF00682 HMGL-like, HMGL-like

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3031106..3032059
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627008.1 hydroxymethylglutaryl-CoA lyase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases