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Nedd1 NEDD1 gamma-tubulin ring complex targeting factor [ Castor canadensis (American beaver) ]

Gene ID: 109701397, updated on 14-Mar-2024

Summary

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Gene symbol
Nedd1
Gene description
NEDD1 gamma-tubulin ring complex targeting factor
See related
Ensembl:ENSCCNG00000015770
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Nedd1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017873202.1 (1130919..1172918, complement)

NW_017873202.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017873202.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in pericentriolar material IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NEDD1
Names
neural precursor cell expressed, developmentally down-regulated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017873202.1 Reference C.can genome v1.0

    Range
    1130919..1172918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020186911.1 → XP_020042500.1  protein NEDD1 isoform X1

    UniProtKB/TrEMBL
    A0A250Y424
    Related
    ENSCCNP00000015355.1, ENSCCNT00000020073.1
    Conserved Domains (2) summary
    cd00200
    Location:24 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:81 → 117
    7WD40; WD40 repeat [structural motif]

  2. XM_020186912.1 → XP_020042501.1  protein NEDD1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7WFV7
    Conserved Domains (2) summary
    cd00200
    Location:24 → 242
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:24 → 60
    7WD40; WD40 repeat [structural motif]

  3. XM_020186913.1 → XP_020042502.1  protein NEDD1 isoform X3

    UniProtKB/TrEMBL
    A0A8B7WFW1
    Conserved Domains (2) summary
    cd00200
    Location:2 → 210
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:34 → 69
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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