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Trpm3 transient receptor potential cation channel subfamily M member 3 [ Castor canadensis (American beaver) ]

Gene ID: 109698196, updated on 14-Mar-2024

Summary

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Gene symbol
Trpm3
Gene description
transient receptor potential cation channel subfamily M member 3
See related
Ensembl:ENSCCNG00000018326
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017872212.1 (268342..786474, complement)

NW_017872212.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 4, mitochondrial pseudogene Neighboring gene structural maintenance of chromosomes 5 Neighboring gene KLF transcription factor 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017872212.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transient receptor potential cation channel subfamily M member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017872212.1 Reference C.can genome v1.0

    Range
    268342..786474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020182248.1 → XP_020037837.1  transient receptor potential cation channel subfamily M member 3 isoform X19

    UniProtKB/TrEMBL
    A0A8B7W1L9
    Conserved Domains (2) summary
    pfam16519
    Location:1202 → 1253
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:852 → 1170
    TRP_2; Transient receptor ion channel II

  2. XM_020182237.1 → XP_020037826.1  transient receptor potential cation channel subfamily M member 3 isoform X9

    UniProtKB/TrEMBL
    A0A8B7W0Y7, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1180 → 1231
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1150 → 1259
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:830 → 1148
    TRP_2; Transient receptor ion channel II

  3. XM_020182232.1 → XP_020037821.1  transient receptor potential cation channel subfamily M member 3 isoform X4

    UniProtKB/TrEMBL
    A0A8B7W0X9, A0A8C0ZTZ3
    Conserved Domains (3) summary
    pfam16519
    Location:1202 → 1253
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1172 → 1281
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:840 → 1170
    TRP_2; Transient receptor ion channel II

  4. XM_020182234.1 → XP_020037823.1  transient receptor potential cation channel subfamily M member 3 isoform X6

    UniProtKB/TrEMBL
    A0A8B7W1R4, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1192 → 1243
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1162 → 1271
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:842 → 1160
    TRP_2; Transient receptor ion channel II

  5. XM_020182233.1 → XP_020037822.1  transient receptor potential cation channel subfamily M member 3 isoform X5

    UniProtKB/TrEMBL
    A0A8B7W1K1, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1202 → 1253
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1172 → 1281
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:852 → 1170
    TRP_2; Transient receptor ion channel II

  6. XM_020182235.1 → XP_020037824.1  transient receptor potential cation channel subfamily M member 3 isoform X7

    UniProtKB/TrEMBL
    A0A8B7W2A0, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1190 → 1241
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1160 → 1269
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:840 → 1158
    TRP_2; Transient receptor ion channel II

  7. XM_020182247.1 → XP_020037836.1  transient receptor potential cation channel subfamily M member 3 isoform X18

    UniProtKB/TrEMBL
    A0A8B7W0Z7, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1056 → 1107
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1026 → 1135
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:706 → 1024
    TRP_2; Transient receptor ion channel II

  8. XM_020182246.1 → XP_020037835.1  transient receptor potential cation channel subfamily M member 3 isoform X17

    UniProtKB/TrEMBL
    A0A8B7W6F9, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1066 → 1117
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1036 → 1145
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:716 → 1034
    TRP_2; Transient receptor ion channel II

  9. XM_020182245.1 → XP_020037834.1  transient receptor potential cation channel subfamily M member 3 isoform X16

    UniProtKB/TrEMBL
    A0A8B7W2B0, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1068 → 1119
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1038 → 1147
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:718 → 1036
    TRP_2; Transient receptor ion channel II

  10. XM_020182243.1 → XP_020037832.1  transient receptor potential cation channel subfamily M member 3 isoform X15

    UniProtKB/TrEMBL
    A0A8B7W1L2, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1078 → 1129
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1048 → 1157
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:728 → 1046
    TRP_2; Transient receptor ion channel II

  11. XM_020182242.1 → XP_020037831.1  transient receptor potential cation channel subfamily M member 3 isoform X14

    UniProtKB/TrEMBL
    A0A8B7W0Z3, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1081 → 1132
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1051 → 1160
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:731 → 1049
    TRP_2; Transient receptor ion channel II

  12. XM_020182241.1 → XP_020037830.1  transient receptor potential cation channel subfamily M member 3 isoform X13

    UniProtKB/TrEMBL
    A0A8B7W6F4, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1091 → 1142
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1061 → 1170
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:741 → 1059
    TRP_2; Transient receptor ion channel II

  13. XM_020182249.1 → XP_020037838.1  transient receptor potential cation channel subfamily M member 3 isoform X20

    UniProtKB/TrEMBL
    A0A8B7W1T2
    Conserved Domains (2) summary
    pfam16519
    Location:1190 → 1241
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:840 → 1158
    TRP_2; Transient receptor ion channel II

  14. XM_020182240.1 → XP_020037829.1  transient receptor potential cation channel subfamily M member 3 isoform X12

    UniProtKB/TrEMBL
    A0A8B7W2A5, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1172 → 1223
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1142 → 1251
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:822 → 1140
    TRP_2; Transient receptor ion channel II

  15. XM_020182239.1 → XP_020037828.1  transient receptor potential cation channel subfamily M member 3 isoform X11

    UniProtKB/TrEMBL
    A0A8B7W1S0, A0A8C0WX86
    Related
    ENSCCNP00000018290.1, ENSCCNT00000023784.1
    Conserved Domains (3) summary
    pfam16519
    Location:1174 → 1225
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1144 → 1253
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:824 → 1142
    TRP_2; Transient receptor ion channel II

  16. XM_020182236.1 → XP_020037825.1  transient receptor potential cation channel subfamily M member 3 isoform X8

    UniProtKB/TrEMBL
    A0A8B7W6E8, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1184 → 1235
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1154 → 1263
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:834 → 1152
    TRP_2; Transient receptor ion channel II

  17. XM_020182238.1 → XP_020037827.1  transient receptor potential cation channel subfamily M member 3 isoform X10

    UniProtKB/TrEMBL
    A0A8B7W1K7, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1175 → 1226
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1145 → 1254
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:719 → 1143
    TRP_2; Transient receptor ion channel II

  18. XM_020182230.1 → XP_020037819.1  transient receptor potential cation channel subfamily M member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8B7W297, A0A8C0ZTZ3
    Related
    ENSCCNP00000018285.1, ENSCCNT00000023779.1
    Conserved Domains (3) summary
    pfam16519
    Location:1214 → 1265
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1184 → 1293
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:852 → 1182
    TRP_2; Transient receptor ion channel II

  19. XM_020182231.1 → XP_020037820.1  transient receptor potential cation channel subfamily M member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8B7W6E1, A0A8C0WX86
    Conserved Domains (3) summary
    pfam16519
    Location:1205 → 1256
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1175 → 1284
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:855 → 1173
    TRP_2; Transient receptor ion channel II

  20. XM_020182229.1 → XP_020037818.1  transient receptor potential cation channel subfamily M member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8B7W1Q8, A0A8C0WWE0
    Conserved Domains (3) summary
    pfam16519
    Location:1215 → 1266
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:1185 → 1294
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:865 → 1183
    TRP_2; Transient receptor ion channel II

  21. XM_020182250.1 → XP_020037839.1  transient receptor potential cation channel subfamily M member 3 isoform X21

    UniProtKB/TrEMBL
    A0A8B7W2B5
    Conserved Domains (1) summary
    cl26777
    Location:713 → 869
    TRP_2; Transient receptor ion channel II
Nucleotide Protein
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