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Rph3a rabphilin 3A [ Castor canadensis (American beaver) ]

Gene ID: 109696290, updated on 14-Mar-2024

Summary

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Gene symbol
Rph3a
Gene description
rabphilin 3A
See related
Ensembl:ENSCCNG00000022763
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Rph3a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871799.1 (508868..567744)

NW_017871799.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L6 Neighboring gene protein tyrosine phosphatase non-receptor type 11 Neighboring gene 2'-5'-oligoadenylate synthase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871799.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rabphilin-3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871799.1 Reference C.can genome v1.0

    Range
    508868..567744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020179296.1 → XP_020034885.1  rabphilin-3A

    UniProtKB/TrEMBL
    A0A8B7VXB5, A0A8C0X8C5
    Related
    ENSCCNP00000023199.1, ENSCCNT00000029664.1
    Conserved Domains (3) summary
    cd04035
    Location:391 → 514
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:551 → 683
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    cd15762
    Location:92 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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