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Tspo translocator protein [ Castor canadensis (American beaver) ]

Gene ID: 109693118, updated on 14-Mar-2024

Summary

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Gene symbol
Tspo
Gene description
translocator protein
See related
Ensembl:ENSCCNG00000010325
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871324.1 (504185..512808)

NW_017871324.1Genomic Context describing neighboring genes Neighboring gene BCL2 interacting killer Neighboring gene malonyl-CoA-acyl carrier protein transacylase Neighboring gene tubulin tyrosine ligase like 12 Neighboring gene signal peptide, CUB domain and EGF like domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871324.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translocator protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871324.1 Reference C.can genome v1.0

    Range
    504185..512808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020174203.1 → XP_020029792.1  translocator protein

    UniProtKB/TrEMBL
    A0A250YB23
    Related
    ENSCCNP00000009804.1, ENSCCNT00000012898.1
    Conserved Domains (1) summary
    pfam03073
    Location:13 → 155
    TspO_MBR; TspO/MBR family
Nucleotide Protein
Heading Accession and Version

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