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Bbip1 BBSome interacting protein 1 [ Castor canadensis (American beaver) ]

Gene ID: 109691508, updated on 14-Mar-2024

Summary

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Gene symbol
Bbip1
Gene description
BBSome interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871114.1 (349251..367533, complement)

NW_017871114.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 20 Neighboring gene programmed cell death 4 Neighboring gene SHOC2 leucine rich repeat scaffold protein Neighboring gene adrenoceptor alpha 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871114.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor localization to non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BBSome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: BBSome-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871114.1 Reference C.can genome v1.0

    Range
    349251..367533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020171559.1 → XP_020027148.1  LOW QUALITY PROTEIN: BBSome-interacting protein 1

    UniProtKB/TrEMBL
    A0A8B7V5Z8
    Conserved Domains (1) summary
    pfam14777
    Location:111 → 165
    BBIP10; Cilia BBSome complex subunit 10
Nucleotide Protein
Heading Accession and Version

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