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Wdfy3 WD repeat and FYVE domain containing 3 [ Castor canadensis (American beaver) ]

Gene ID: 109690817, updated on 14-Mar-2024

Summary

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Gene symbol
Wdfy3
Gene description
WD repeat and FYVE domain containing 3
See related
Ensembl:ENSCCNG00000020304
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869609.1 (178982..281018, complement)

NW_017869609.1Genomic Context describing neighboring genes Neighboring gene WD repeat and FYVE domain-containing protein 3-like Neighboring gene CDP-diacylglycerol synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017869609.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat and FYVE domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017869609.1 Reference C.can genome v1.0

    Range
    178982..281018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020170402.1 → XP_020025991.1  WD repeat and FYVE domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8B7V210
    Conserved Domains (6) summary
    cd01201
    Location:2510 → 2633
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    cd15719
    Location:3425 → 3489
    FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
    sd00039
    Location:3060 → 3101
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:2672 → 2952
    Beach; Beige/BEACH domain
    pfam15787
    Location:1375 → 1544
    DUF4704; Domain of unknown function (DUF4704)
    cl25539
    Location:3042 → 3223
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_020170393.1 → XP_020025982.1  WD repeat and FYVE domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8B7V3U9
    Conserved Domains (6) summary
    cd01201
    Location:2524 → 2647
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    cd15719
    Location:3439 → 3503
    FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
    sd00039
    Location:3074 → 3115
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:2686 → 2966
    Beach; Beige/BEACH domain
    pfam15787
    Location:1375 → 1544
    DUF4704; Domain of unknown function (DUF4704)
    cl25539
    Location:3056 → 3237
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_020170384.1 → XP_020025973.1  WD repeat and FYVE domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A250Y8L3
    Conserved Domains (6) summary
    cd01201
    Location:2525 → 2648
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    cd15719
    Location:3440 → 3504
    FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
    sd00039
    Location:3075 → 3116
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:2687 → 2967
    Beach; Beige/BEACH domain
    pfam15787
    Location:1375 → 1544
    DUF4704; Domain of unknown function (DUF4704)
    cl25539
    Location:3057 → 3238
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_020170416.1 → XP_020026005.1  WD repeat and FYVE domain-containing protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8B7V5G4
    Conserved Domains (6) summary
    cd01201
    Location:2506 → 2629
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    cd15719
    Location:3421 → 3485
    FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
    sd00039
    Location:3056 → 3097
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:2668 → 2948
    Beach; Beige/BEACH domain
    pfam15787
    Location:1375 → 1544
    DUF4704; Domain of unknown function (DUF4704)
    cl25539
    Location:3038 → 3219
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_020170410.1 → XP_020025999.1  WD repeat and FYVE domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8B7V4L5
    Related
    ENSCCNP00000020793.1, ENSCCNT00000026818.1
    Conserved Domains (6) summary
    cd01201
    Location:2507 → 2630
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    cd15719
    Location:3422 → 3486
    FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
    sd00039
    Location:3057 → 3098
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:2669 → 2949
    Beach; Beige/BEACH domain
    pfam15787
    Location:1375 → 1544
    DUF4704; Domain of unknown function (DUF4704)
    cl25539
    Location:3039 → 3220
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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