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Gda guanine deaminase [ Castor canadensis (American beaver) ]

Gene ID: 109684839, updated on 14-Mar-2024

Summary

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Gene symbol
Gda
Gene description
guanine deaminase
See related
Ensembl:ENSCCNG00000031779
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870279.1 (28972..118843)

NW_017870279.1Genomic Context describing neighboring genes Neighboring gene proline rich protein HaeIII subfamily 2 Neighboring gene putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870279.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in guanine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870279.1 Reference C.can genome v1.0

    Range
    28972..118843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020161410.1 → XP_020016999.1  guanine deaminase isoform X1

    UniProtKB/TrEMBL
    A0A8B7UCR1, A0A8C0XVR9
    Related
    ENSCCNP00000033624.1, ENSCCNT00000042148.1
    Conserved Domains (1) summary
    cd01303
    Location:13 → 444
    GDEase; Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and ...

  2. XM_020161411.1 → XP_020017000.1  guanine deaminase isoform X2

    UniProtKB/TrEMBL
    A0A8B7UG83, A0A8C0XVR9
    Conserved Domains (2) summary
    cd01303
    Location:21 → 423
    GDEase; Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and ...
    pfam08333
    Location:4 → 20
    DUF1725; Protein of unknown function (DUF1725)

  3. XM_020161413.1 → XP_020017002.1  guanine deaminase isoform X4

    UniProtKB/TrEMBL
    A0A8B7UCL3, A0A8C0XVR9
    Conserved Domains (1) summary
    cd01303
    Location:1 → 370
    GDEase; Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and ...

  4. XM_020161412.1 → XP_020017001.1  guanine deaminase isoform X3

    UniProtKB/TrEMBL
    A0A250Y0E8, A0A8C0XVR9
    Conserved Domains (1) summary
    cd01303
    Location:8 → 410
    GDEase; Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and ...
Nucleotide Protein
Heading Accession and Version

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