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Erc1 ELKS/RAB6-interacting/CAST family member 1 [ Castor canadensis (American beaver) ]

Gene ID: 109683375, updated on 14-Mar-2024

Summary

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Gene symbol
Erc1
Gene description
ELKS/RAB6-interacting/CAST family member 1
See related
Ensembl:ENSCCNG00000026918
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Erc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870106.1 (954505..1099105)

NW_017870106.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene small nuclear ribonucleoprotein G pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870106.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maintenance of presynaptic active zone structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton of presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ELKS/Rab6-interacting/CAST family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870106.1 Reference C.can genome v1.0

    Range
    954505..1099105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020159173.1 → XP_020014762.1  ELKS/Rab6-interacting/CAST family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7U691, A0A8C0XK52
    Related
    ENSCCNP00000027871.1, ENSCCNT00000035250.1
    Conserved Domains (1) summary
    cl25732
    Location:155 → 755
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_020159171.1 → XP_020014760.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0XHQ9, A0A8C0XK52
    Related
    ENSCCNP00000027870.1, ENSCCNT00000035249.1
    Conserved Domains (1) summary
    cl25732
    Location:155 → 783
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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