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tbck TBC1 domain containing kinase [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109638268, updated on 14-Mar-2024

Summary

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Gene symbol
tbck
Gene description
TBC1 domain containing kinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859681.1 (3267997..3305905)

NW_017859681.1Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 2 Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 1 Neighboring gene arachidonate 15-lipoxygenase B-like Neighboring gene nephronectin a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859681.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC domain-containing protein kinase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859681.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    3267997..3305905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020101171.1 → XP_019956730.1  TBC domain-containing protein kinase-like protein

    Conserved Domains (3) summary
    smart00164
    Location:474 → 637
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    smart00220
    Location:50 → 280
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl00125
    Location:753 → 844
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
Nucleotide Protein
Heading Accession and Version

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