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jcada junctional cadherin 5 associated a [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109629872, updated on 14-Mar-2024

Summary

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Gene symbol
jcada
Gene description
junctional cadherin 5 associated a
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
jcad; kiaa1462
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859653.1 (957782..977563)

NW_017859653.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene mitogen-activated protein kinase kinase kinase 8 Neighboring gene mitochondrial poly(A) polymerase Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859653.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctional protein associated with coronary artery disease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859653.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    957782..977563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020087851.1 → XP_019943410.1  junctional protein associated with coronary artery disease

    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1437
    JCAD; Junctional protein associated with coronary artery disease

  2. XM_020087852.1 → XP_019943411.1  junctional protein associated with coronary artery disease

    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1437
    JCAD; Junctional protein associated with coronary artery disease

  3. XM_020087853.1 → XP_019943412.1  junctional protein associated with coronary artery disease

    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1437
    JCAD; Junctional protein associated with coronary artery disease
Nucleotide Protein
Heading Accession and Version

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