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polr2eb RNA polymerase II, I and III subunit E, b [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109625471, updated on 14-Mar-2024

Summary

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Gene symbol
polr2eb
Gene description
RNA polymerase II, I and III subunit E, b
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
polr2e
Orthologs
zebrafish all
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Genomic context

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See polr2eb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859646.1 (8751202..8754130)

NW_017859646.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a Neighboring gene glutathione peroxidase 4a Neighboring gene Rho GTPase activating protein 45b Neighboring gene tight junction protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859646.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC1
Names
RNA polymerase II subunit E
polymerase (RNA) II (DNA directed) polypeptide E, b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859646.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    8751202..8754130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020080703.1 → XP_019936262.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2

    Conserved Domains (1) summary
    cl00883
    Location:1 → 138
    RNA_pol_Rpb5_C; RNA polymerase Rpb5, C-terminal domain

  2. XM_020080702.1 → XP_019936261.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1

    Conserved Domains (1) summary
    PLN03111
    Location:1 → 209
    PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional
Nucleotide Protein
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