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ano1a anoctamin 1, calcium activated chloride channel a [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109624866, updated on 14-Mar-2024

Summary

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Gene symbol
ano1a
Gene description
anoctamin 1, calcium activated chloride channel a
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
ano1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859645.1 (17942659..17990226)

NW_017859645.1Genomic Context describing neighboring genes Neighboring gene RWD domain containing 3 Neighboring gene uncharacterized LOC109625138 Neighboring gene high choriolytic enzyme 1-like Neighboring gene Fas (tnfrsf6)-associated via death domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859645.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859645.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    17942659..17990226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020079782.1 → XP_019935341.1  anoctamin-1

    Conserved Domains (2) summary
    pfam04547
    Location:364 → 895
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:158 → 361
    Anoct_dimer; Dimerisation domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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