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ABCA6 ATP binding cassette subfamily A member 6 [ Bos indicus (zebu cattle) ]

Gene ID: 109574000, updated on 14-Mar-2024

Summary

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Gene symbol
ABCA6
Gene description
ATP binding cassette subfamily A member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human all
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Genomic context

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See ABCA6 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
38
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 19 NC_032668.1 (63327424..63387838)

Chromosome 19 - NC_032668.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 10 Neighboring gene uncharacterized LOC109573471 Neighboring gene ATP binding cassette subfamily A member 9 Neighboring gene uncharacterized LOC109574420

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032668.1 Chromosome 19 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family A member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032668.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    63327424..63387838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019981666.1 → XP_019837225.1  ATP-binding cassette sub-family A member 6 isoform X3

    UniProtKB/TrEMBL
    A0A6P5DIK9
    Conserved Domains (2) summary
    cd03263
    Location:479 → 702
    ABC_subfamily_A; ATP-binding cassette domain of the lipid transporters, subfamily A
    cl28181
    Location:170 → 1343
    AAA; ATPases associated with a variety of cellular activities

  2. XM_019981665.1 → XP_019837224.1  ATP-binding cassette sub-family A member 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P5DHR3
    Conserved Domains (1) summary
    cl28181
    Location:170 → 1459
    AAA; ATPases associated with a variety of cellular activities

  3. XM_019981664.1 → XP_019837223.1  ATP-binding cassette sub-family A member 6 isoform X1

    UniProtKB/TrEMBL
    A0A6P5DG81
    Conserved Domains (1) summary
    cl28181
    Location:170 → 1557
    AAA; ATPases associated with a variety of cellular activities
Nucleotide Protein
Heading Accession and Version

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