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SMG9 SMG9 nonsense mediated mRNA decay factor [ Bos indicus (zebu cattle) ]

Gene ID: 109572879, updated on 14-Mar-2024

Summary

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Gene symbol
SMG9
Gene description
SMG9 nonsense mediated mRNA decay factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 18 NC_032667.1 (51677293..51697606, complement)

Chromosome 18 - NC_032667.1Genomic Context describing neighboring genes Neighboring gene histone H2B type 1-like Neighboring gene interferon-inducible GTPase 5 Neighboring gene interferon-inducible GTPase 5-like Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene LY6/PLAUR domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032667.1 Chromosome 18 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SMG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032667.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    51677293..51697606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019980033.1 → XP_019835592.1  protein SMG9

    UniProtKB/TrEMBL
    A0A6P5DEQ1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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