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PEPD peptidase D [ Bos indicus (zebu cattle) ]

Gene ID: 109572307, updated on 14-Mar-2024

Summary

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Gene symbol
PEPD
Gene description
peptidase D
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PEPD in Genome Data Viewer
Location:
chromosome: 18
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 18 NC_032667.1 (43248850..43367696, complement)

Chromosome 18 - NC_032667.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene uncharacterized LOC109572097 Neighboring gene potassium channel tetramerization domain containing 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032667.1 Chromosome 18 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloaminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xaa-Pro dipeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032667.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    43248850..43367696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019978985.1 → XP_019834544.1  xaa-Pro dipeptidase isoform X1

    UniProtKB/TrEMBL
    A0A6P5DAU9
    Conserved Domains (2) summary
    smart01011
    Location:18 → 155
    AMP_N; Aminopeptidase P, N-terminal domain
    cd01087
    Location:192 → 467
    Prolidase; E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.

  2. XM_019978987.1 → XP_019834546.1  xaa-Pro dipeptidase isoform X2

    UniProtKB/TrEMBL
    A0A6P5D8E5
    Conserved Domains (2) summary
    cd01087
    Location:85 → 360
    Prolidase; E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
    cl23800
    Location:1 → 31
    Creatinase_N; Creatinase/Prolidase N-terminal domain

  3. XM_019978986.1 → XP_019834545.1  xaa-Pro dipeptidase isoform X2

    UniProtKB/TrEMBL
    A0A6P5D8E5
    Conserved Domains (2) summary
    cd01087
    Location:85 → 360
    Prolidase; E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
    cl23800
    Location:1 → 31
    Creatinase_N; Creatinase/Prolidase N-terminal domain
Nucleotide Protein
Heading Accession and Version

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