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FBLIM1 filamin binding LIM protein 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109570561, updated on 14-Mar-2024

Summary

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Gene symbol
FBLIM1
Gene description
filamin binding LIM protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 16 NC_032665.1 (49044704..49072317, complement)

Chromosome 16 - NC_032665.1Genomic Context describing neighboring genes Neighboring gene multiple coagulation factor deficiency protein 2 pseudogene Neighboring gene dehydrodolichyl diphosphate synthase complex subunit NUS1 pseudogene Neighboring gene transmembrane protein 82 Neighboring gene solute carrier family 25 member 34

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032665.1 Chromosome 16 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables filamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032665.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    49044704..49072317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019976609.1 → XP_019832168.1  filamin-binding LIM protein 1

    UniProtKB/TrEMBL
    A0A6P5D406
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_019976610.1 → XP_019832169.1  filamin-binding LIM protein 1

    UniProtKB/TrEMBL
    A0A6P5D406
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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