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MYCN MYCN proto-oncogene, bHLH transcription factor [ Bos indicus (zebu cattle) ]

Gene ID: 109566369, updated on 14-Mar-2024

Summary

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Gene symbol
MYCN
Gene description
MYCN proto-oncogene, bHLH transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 11 NC_032660.1 (84682487..84689483, complement)

Chromosome 11 - NC_032660.1Genomic Context describing neighboring genes Neighboring gene RAD51 associated protein 2 Neighboring gene CYFIP related Rac1 interactor A Neighboring gene DEAD-box helicase 1 Neighboring gene NBAS subunit of NRZ tethering complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032660.1 Chromosome 11 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: N-myc proto-oncogene protein
Names
v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032660.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    84682487..84689483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019970676.1 → XP_019826235.1  LOW QUALITY PROTEIN: N-myc proto-oncogene protein

    UniProtKB/TrEMBL
    A0A6P5CKQ3
    Conserved Domains (2) summary
    cd00083
    Location:168 → 227
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam01056
    Location:66 → 161
    Myc_N; Myc amino-terminal region
Nucleotide Protein
Heading Accession and Version

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