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GLI3 GLI family zinc finger 3 [ Bos indicus (zebu cattle) ]

Gene ID: 109557558, updated on 14-Mar-2024

Summary

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Gene symbol
GLI3
Gene description
GLI family zinc finger 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 4 NC_032653.1 (81664876..81880768)

Chromosome 4 - NC_032653.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109557557 Neighboring gene transcriptional activator GLI3-like Neighboring gene inhibin subunit beta A Neighboring gene succinyl-CoA:glutarate-CoA transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032653.1 Chromosome 4 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional activator GLI3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032653.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    81664876..81880768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019958972.1 → XP_019814531.1  transcriptional activator GLI3

    UniProtKB/TrEMBL
    A0A6P5BC64
    Conserved Domains (3) summary
    COG5048
    Location:220 → 568
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:483 → 573
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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