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TFRC transferrin receptor [ Bos indicus (zebu cattle) ]

Gene ID: 109556162, updated on 14-Mar-2024

Summary

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Gene symbol
TFRC
Gene description
transferrin receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 1 NC_032650.1 (71828984..71979505, complement)

Chromosome 1 - NC_032650.1Genomic Context describing neighboring genes Neighboring gene leishmanolysin-like peptidase Neighboring gene tyrosine kinase non receptor 2 Neighboring gene uncharacterized LOC109556181 Neighboring gene uncharacterized LOC109556186 Neighboring gene solute carrier family 51 member A Neighboring gene phosphate cytidylyltransferase 1A, choline Neighboring gene dynein light chain Tctex-type 2B Neighboring gene transmembrane 4 L six family member 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032650.1 Chromosome 1 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transferrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transferrin transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transferrin receptor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032650.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    71828984..71979505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019957264.1 → XP_019812823.1  transferrin receptor protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5B2L5
    Conserved Domains (3) summary
    cd02128
    Location:283 → 459
    PA_TfR; Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. ...
    pfam04253
    Location:724 → 828
    TFR_dimer; Transferrin receptor-like dimerisation domain
    cl14876
    Location:449 → 692
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42

  2. XM_019957281.1 → XP_019812840.1  transferrin receptor protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5BP27
    Conserved Domains (3) summary
    cd02128
    Location:210 → 386
    PA_TfR; Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. ...
    pfam04253
    Location:651 → 755
    TFR_dimer; Transferrin receptor-like dimerisation domain
    cl14876
    Location:376 → 619
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42

  3. XM_019957272.1 → XP_019812831.1  transferrin receptor protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5BP27
    Conserved Domains (3) summary
    cd02128
    Location:210 → 386
    PA_TfR; Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. ...
    pfam04253
    Location:651 → 755
    TFR_dimer; Transferrin receptor-like dimerisation domain
    cl14876
    Location:376 → 619
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42

  4. XM_019957290.1 → XP_019812849.1  transferrin receptor protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5BP27
    Conserved Domains (3) summary
    cd02128
    Location:210 → 386
    PA_TfR; Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. ...
    pfam04253
    Location:651 → 755
    TFR_dimer; Transferrin receptor-like dimerisation domain
    cl14876
    Location:376 → 619
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42
Nucleotide Protein
Heading Accession and Version

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