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P4HTM prolyl 4-hydroxylase, transmembrane [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 109549373, updated on 14-Mar-2024

Summary

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Gene symbol
P4HTM
Gene description
prolyl 4-hydroxylase, transmembrane
See related
EnsemblRapid:ENSTTRG00000017345
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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See P4HTM in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 10 NC_047043.1 (63944118..63959181)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842956.1 (241360..256488)

Chromosome 10 - NC_047043.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10-like Neighboring gene small nucleolar RNA SNORA70 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene uncharacterized LOC117313931 Neighboring gene WD repeat domain 6 Neighboring gene DALR anticodon binding domain containing 3 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane prolyl 4-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047043.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    63944118..63959181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019931634.2 → XP_019787193.1  transmembrane prolyl 4-hydroxylase

    UniProtKB/TrEMBL
    A0A2U4B1U4
    Related
    ENSTTRP00000030502.1, ENSTTRT00000031824.1
    Conserved Domains (2) summary
    smart00702
    Location:240 → 452
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam13499
    Location:186 → 246
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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