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lyve1a lymphatic vessel endothelial hyaluronic receptor 1a [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109525838, updated on 14-Mar-2024

Summary

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Gene symbol
lyve1a
Gene description
lymphatic vessel endothelial hyaluronic receptor 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
lyve1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805824.1 (2320505..2324212)

NW_017805824.1Genomic Context describing neighboring genes Neighboring gene CTR9 homolog, Paf1/RNA polymerase II complex component Neighboring gene murine retrovirus integration site 1 homolog Neighboring gene adenosine monophosphate deaminase 3a Neighboring gene adrenomedullin a Neighboring gene SET binding factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805824.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphatic vessel endothelial hyaluronic acid receptor 1
Names
lymphatic vessel endothelial hyaluronan receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805824.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    2320505..2324212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019886642.1 → XP_019742201.1  lymphatic vessel endothelial hyaluronic acid receptor 1

    Conserved Domains (1) summary
    cl02612
    Location:35 → 135
    Link_Domain; The link domain is a hyaluronan (HA)-binding domain. It functions to mediate adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It is found in the CD44 receptor and in human TSG-6. TSG-6 is the protein product of the tumor ...
Nucleotide Protein
Heading Accession and Version

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