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ddit4 DNA-damage-inducible transcript 4 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109522545, updated on 14-Mar-2024

Summary

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Gene symbol
ddit4
Gene description
DNA-damage-inducible transcript 4
See related
Ensembl:ENSHCOG00000016167
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017804876.1 (224217..226136, complement)

NW_017804876.1Genomic Context describing neighboring genes Neighboring gene SEC31 homolog B, COPII coat complex component Neighboring gene stearoyl-CoA desaturase (delta-9-desaturase) Neighboring gene DnaJ heat shock protein family (Hsp40) member B12b Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene anaphase promoting complex subunit 16 Neighboring gene uncharacterized LOC109522468

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017804876.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 14-3-3 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA damage-inducible transcript 4 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017804876.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    224217..226136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019881217.1 → XP_019736776.1  DNA damage-inducible transcript 4 protein

    UniProtKB/TrEMBL
    A0A3Q2YI48
    Related
    ENSHCOP00000013082.1, ENSHCOT00000020318.1
    Conserved Domains (1) summary
    pfam07809
    Location:83 → 200
    RTP801_C; RTP801 C-terminal region
Nucleotide Protein
Heading Accession and Version

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