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pgap1 post-GPI attachment to proteins inositol deacylase 1 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109517118, updated on 14-Mar-2024

Summary

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Gene symbol
pgap1
Gene description
post-GPI attachment to proteins inositol deacylase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805375.1 (64937..76587)

NW_017805375.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 40 member 1 Neighboring gene WD repeat domain 75 Neighboring gene histone deacetylase 4-like Neighboring gene uncharacterized LOC109517117

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805375.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol deacylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI inositol-deacylase
Names
post-GPI attachment to proteins 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805375.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    64937..76587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019872075.1 → XP_019727634.1  GPI inositol-deacylase isoform X1

    Conserved Domains (1) summary
    pfam07819
    Location:97 → 318
    PGAP1; PGAP1-like protein

  2. XM_019872076.1 → XP_019727635.1  GPI inositol-deacylase isoform X2

    Conserved Domains (1) summary
    pfam07819
    Location:97 → 318
    PGAP1; PGAP1-like protein

  3. XM_019872077.1 → XP_019727636.1  GPI inositol-deacylase isoform X3

    Conserved Domains (1) summary
    pfam07819
    Location:97 → 318
    PGAP1; PGAP1-like protein
Nucleotide Protein
Heading Accession and Version

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