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zglp1 zinc finger GATA like protein 1 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109510972, updated on 14-Mar-2024

Summary

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Gene symbol
zglp1
Gene description
zinc finger GATA like protein 1
See related
Ensembl:ENSHCOG00000016944
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017842060.1 (8244726..8250041, complement)

NW_017842060.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109511096 Neighboring gene forkhead box protein D1-like Neighboring gene ferredoxin 2 Neighboring gene uncharacterized LOC109511518

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017842060.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GATA-type zinc finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017842060.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    8244726..8250041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019861695.1 → XP_019717254.1  GATA-type zinc finger protein 1

    UniProtKB/TrEMBL
    A0A3Q2YJW8
    Conserved Domains (1) summary
    smart00401
    Location:416 → 453
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]

  2. XM_019861696.1 → XP_019717255.1  GATA-type zinc finger protein 1

    UniProtKB/TrEMBL
    A0A3Q2YJW8
    Related
    ENSHCOP00000013727.1, ENSHCOT00000021146.1
    Conserved Domains (1) summary
    smart00401
    Location:416 → 453
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
Nucleotide Protein
Heading Accession and Version

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