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capgb capping protein (actin filament), gelsolin-like b [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109508501, updated on 14-Mar-2024

Summary

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Gene symbol
capgb
Gene description
capping protein (actin filament), gelsolin-like b
See related
Ensembl:ENSHCOG00000011861
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Also known as
capg
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017808403.1 (901097..908515)

NW_017808403.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 4 Neighboring gene RNA polymerase II subunit A Neighboring gene E3 ubiquitin-protein ligase TRIM39-like Neighboring gene uncharacterized LOC109508505 Neighboring gene uncharacterized LOC109508504

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017808403.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage-capping protein
Names
capping actin protein, gelsolin like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017808403.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    901097..908515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019858533.1 → XP_019714092.1  macrophage-capping protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q2Y8F8
    Related
    ENSHCOP00000009431.1, ENSHCOT00000025809.1
    Conserved Domains (3) summary
    cd11289
    Location:138 → 225
    gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
    cd11290
    Location:16 → 119
    gelsolin_S1_like; Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins
    cd11292
    Location:244 → 345
    gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins

  2. XM_019858530.1 → XP_019714089.1  macrophage-capping protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q2Y8F8
    Conserved Domains (3) summary
    cd11289
    Location:138 → 225
    gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
    cd11290
    Location:16 → 119
    gelsolin_S1_like; Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins
    cd11292
    Location:244 → 345
    gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins

  3. XM_019858532.1 → XP_019714091.1  macrophage-capping protein isoform X2

    Conserved Domains (3) summary
    cd11289
    Location:172 → 259
    gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
    cd11290
    Location:50 → 153
    gelsolin_S1_like; Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins
    cd11292
    Location:278 → 379
    gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins
Nucleotide Protein
Heading Accession and Version

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