U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

THBS3 thrombospondin 3 [ Rhinolophus sinicus (Chinese rufous horseshoe bat) ]

Gene ID: 109434678, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
THBS3
Gene description
thrombospondin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus sinicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See THBS3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current ASM188883v1 (GCF_001888835.1) Unplaced Scaffold NW_017739451.1 (93265..102924)

NW_017739451.1Genomic Context describing neighboring genes Neighboring gene glucosylceramidase beta Neighboring gene metaxin 1 Neighboring gene mucin 1, cell surface associated Neighboring gene tripartite motif containing 46

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017739451.1 Unplaced Scaffold Reference ASM188883v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
thrombospondin-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rhinolophus sinicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM188883v1

Genomic

  1. NW_017739451.1 Reference ASM188883v1

    Range
    93265..102924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019711854.1 → XP_019567413.1  thrombospondin-3 isoform X3

    Conserved Domains (7) summary
    cd00054
    Location:316 → 352
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    sd00001
    Location:610 → 647
    TSP3; TSP3 repeat_long [structural motif]
    sd00002
    Location:551 → 586
    TSP3; TSP3 repeat_long [structural motif]
    cd16079
    Location:227 → 269
    TSP-3cc; Coiled coil region of thrombospondin-3 (TSP-3)
    pfam02412
    Location:551 → 586
    TSP_3; Thrombospondin type 3 repeat
    NF000535
    Location:434 → 652
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl22861
    Location:23 → 193
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  2. XM_019711852.1 → XP_019567411.1  thrombospondin-3 isoform X1

    Conserved Domains (8) summary
    smart00179
    Location:405 → 439
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:351 → 387
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    sd00001
    Location:645 → 682
    TSP3; TSP3 repeat_long [structural motif]
    sd00002
    Location:586 → 621
    TSP3; TSP3 repeat_long [structural motif]
    cd16079
    Location:262 → 304
    TSP-3cc; Coiled coil region of thrombospondin-3 (TSP-3)
    pfam02412
    Location:586 → 621
    TSP_3; Thrombospondin type 3 repeat
    NF000535
    Location:469 → 687
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl22861
    Location:61 → 228
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  3. XM_019711853.1 → XP_019567412.1  thrombospondin-3 isoform X2

    Conserved Domains (7) summary
    cd00054
    Location:341 → 377
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    sd00001
    Location:635 → 672
    TSP3; TSP3 repeat_long [structural motif]
    sd00002
    Location:576 → 611
    TSP3; TSP3 repeat_long [structural motif]
    cd16079
    Location:252 → 294
    TSP-3cc; Coiled coil region of thrombospondin-3 (TSP-3)
    pfam02412
    Location:576 → 611
    TSP_3; Thrombospondin type 3 repeat
    NF000535
    Location:459 → 677
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl22861
    Location:50 → 218
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  4. XM_019711855.1 → XP_019567414.1  thrombospondin-3 isoform X4

    Conserved Domains (7) summary
    cd00054
    Location:304 → 340
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    sd00001
    Location:598 → 635
    TSP3; TSP3 repeat_long [structural motif]
    sd00002
    Location:539 → 574
    TSP3; TSP3 repeat_long [structural motif]
    cd16079
    Location:215 → 257
    TSP-3cc; Coiled coil region of thrombospondin-3 (TSP-3)
    pfam02412
    Location:539 → 574
    TSP_3; Thrombospondin type 3 repeat
    NF000535
    Location:422 → 640
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl22861
    Location:14 → 181
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.